BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012B12LP1|AL426328
(801 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1148 1561 0.0
>3x_Contig1148
Length = 4745
Score = 1561 bits (787), Expect = 0.0
Identities = 797/800 (99%), Gaps = 1/800 (0%)
Strand = Plus / Minus
Query: 2 tcmttctgccatcgcaatggctggtgctggtgctggtggtatggtagggcttgaattgac 61
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3810 tccttctgccatcgcaatggctggtgctggtgctggtggtatggtagggcttgaattgac 3751
Query: 62 cgattttgttttcatcttgaacactgcggatgcagtnaaaatctttttcacagttcggtt 121
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 3750 cgattttgttttcatcttgaacactgcggatgcagttaaa-tctttttcacagttcggtt 3692
Query: 122 ctatcactttgggtggtaacgtctctgttgcggctggtccattgggtagaaacgcagaag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3691 ctatcactttgggtggtaacgtctctgttgcggctggtccattgggtagaaacgcagaag 3632
Query: 182 ctgcagcttctgcatccactagcggtgttgctgccatcttcgcttattctaagactaaag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3631 ctgcagcttctgcatccactagcggtgttgctgccatcttcgcttattctaagactaaag 3572
Query: 242 gtttatttgccggtgtctcgttagaaggttcggtgatcattgaaagaagagaggcaaaca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3571 gtttatttgccggtgtctcgttagaaggttcggtgatcattgaaagaagagaggcaaaca 3512
Query: 302 gaaagttctacggtaacaattgtaccgcaaagatgattctatctggccgtgtcagacctc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3511 gaaagttctacggtaacaattgtaccgcaaagatgattctatctggccgtgtcagacctc 3452
Query: 362 ctccatcggtagaccctctattccgtgttctagagtcccgtgccttcaactatagatctc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3451 ctccatcggtagaccctctattccgtgttctagagtcccgtgccttcaactatagatctc 3392
Query: 422 caagaggtgacaactacgatgatgatgacgactacgacgaagacgaagacggagagtact 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3391 caagaggtgacaactacgatgatgatgacgactacgacgaagacgaagacggagagtact 3332
Query: 482 ataacgatatcccatctagcttcgattcagatgatttggattctcaaagacctaacacta 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3331 ataacgatatcccatctagcttcgattcagatgatttggattctcaaagacctaacacta 3272
Query: 542 gatccactagaagaagggctaattcatacagatctacaactagcgatgactcggatgatt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3271 gatccactagaagaagggctaattcatacagatctacaactagcgatgactcggatgatt 3212
Query: 602 acctggatgaagatgaagaacgctactcatcatctcgttattctaggagacaaggaccct 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3211 acctggatgaagatgaagaacgctactcatcatctcgttattctaggagacaaggaccct 3152
Query: 662 cttctaactctcgttgggaagatgaagtttatgacttaaatgatagattcgaaagaacaa 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3151 cttctaactctcgttgggaagatgaagtttatgacttaaatgatagattcgaaagaacaa 3092
Query: 722 acctcaatacaaggaacgctagaggtggtccttcaagaccaaaatcggaaaaaccagact 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3091 acctcaatacaaggaacgctagaggtggtccttcaagaccaaaatcggaaaaaccagact 3032
Query: 782 ttggatccagttcgttctcc 801
||||||||||||||||||||
Sbjct: 3031 ttggatccagttcgttctcc 3012
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6267
Number of Sequences: 1807
Number of extensions: 6267
Number of successful extensions: 73
Number of sequences better than 1.0e-20: 1
length of query: 801
length of database: 10,358,551
effective HSP length: 16
effective length of query: 785
effective length of database: 10,329,639
effective search space: 8108766615
effective search space used: 8108766615
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)